EnhancerDB
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  3. rs12978875[chr19:3386573]
Enhancers that have rs12978875[chr19:3386573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12978875[chr19:3386573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 21839142
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 108366435
chr19 3386564 3386578 PLAG1 JASPAR yes 112126616
Genes associated with rs12978875[chr19:3386573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More