EnhancerDB
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  3. rs12979446[chr19:7859285]
Enhancers that have rs12979446[chr19:7859285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7855285 7886615 enh17897
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12979446[chr19:7859285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7859131 7860135 ZNF274 GTRD no Bone Marrow (K562) 21846757
chr19 7859153 7860028 ZNF274 GTRD no Blood (GM12878) 21846758
chr19 7859273 7859288 HNF1A JASPAR yes 112338144
chr19 7859274 7859286 HNF1B JASPAR yes 112338145
chr19 7859274 7859287 HNF1B JASPAR yes 112338146
chr19 7859274 7859290 POU4F2 JASPAR yes 112338147
chr19 7859274 7859290 POU4F3 JASPAR yes 112338148
chr19 7859283 7859293 CUX1 JASPAR yes 112338149
chr19 7859283 7859293 CUX2 JASPAR yes 112338150
Genes associated with rs12979446[chr19:7859285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More