EnhancerDB
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  3. rs12980774[chr19:3410135]
Enhancers that have rs12980774[chr19:3410135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3395005 3410358 enh17863
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs12980774[chr19:3410135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3408828 3410590 ZNF274 GTRD no Liver (HepG2) 21839386
chr19 3408828 3410590 ZNF274 GTRD no Liver (HepG2) 21839387
chr19 3408828 3410590 ZNF274 GTRD no Liver (HepG2) 108366817
chr19 3408917 3410170 ZNF274 GTRD no Liver (HepG2) 21839390
chr19 3408917 3410170 ZNF274 GTRD no Liver (HepG2) 108366820
chr19 3408949 3410182 ZNF274 GTRD no Liver (HepG2) 21839392
chr19 3408949 3410182 ZNF274 GTRD no Liver (HepG2) 108366822
chr19 3408981 3410654 ZNF274 GTRD no Liver (HepG2) 21839394
chr19 3408981 3410654 ZNF274 GTRD no Liver (HepG2) 21839395
chr19 3408981 3410654 ZNF274 GTRD no Liver (HepG2) 108366824
chr19 3409210 3410180 ZNF274 GTRD no Liver (HepG2) 21839407
chr19 3409210 3410180 ZNF274 GTRD no Liver (HepG2) 108366839
chr19 3409454 3410240 ZNF143 GTRD no Epithelial (MCF-7) 108366853
chr19 3410134 3410144 SREBF2 JASPAR yes 112129676
Genes associated with rs12980774[chr19:3410135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More