EnhancerDB
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  3. rs12988327[chr2:204441893]
Enhancers that have rs12988327[chr2:204441893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs12988327[chr2:204441893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204441872 204441893 ZNF263 JASPAR yes 80241434
chr2 204441873 204441893 RREB1 JASPAR yes 80241435
chr2 204441880 204441894 RXRB JASPAR yes 80241437
chr2 204441880 204441894 RXRG JASPAR yes 80241438
chr2 204441880 204441895 NR2C2 JASPAR yes 80241439
chr2 204441880 204441900 RREB1 JASPAR yes 80241440
chr2 204441883 204441893 SP1 JASPAR yes 80241441
Genes associated with rs12988327[chr2:204441893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More