EnhancerDB
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  3. rs12992882[chr2:223699865]
Enhancers that have rs12992882[chr2:223699865]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223687885 223715130 enh34305
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs12992882[chr2:223699865]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223699849 223699865 GLIS1 JASPAR yes 81217400
chr2 223699860 223699870 ALX3 JASPAR yes 81217401
chr2 223699860 223699870 EMX1 JASPAR yes 81217402
chr2 223699860 223699870 GSX2 JASPAR yes 81217403
chr2 223699860 223699870 HOXA2 JASPAR yes 81217404
chr2 223699860 223699870 HOXB2 JASPAR yes 81217405
chr2 223699860 223699870 HOXB3 JASPAR yes 81217406
chr2 223699860 223699870 MEOX1 JASPAR yes 81217407
chr2 223699860 223699870 MEOX2 JASPAR yes 81217408
chr2 223699860 223699870 MIXL1 JASPAR yes 81217409
chr2 223699860 223699870 MNX1 JASPAR yes 81217410
chr2 223699861 223699869 LMX1A JASPAR yes 81217411
chr2 223699861 223699869 LMX1B JASPAR yes 81217412
chr2 223699861 223699869 NKX6-1 JASPAR yes 81217413
chr2 223699861 223699869 NKX6-2 JASPAR yes 81217414
chr2 223699861 223699869 PDX1 JASPAR yes 81217415
chr2 223699861 223699869 VAX1 JASPAR yes 81217416
chr2 223699861 223699869 VAX2 JASPAR yes 81217417
chr2 223699861 223699869 VSX1 JASPAR yes 81217418
Genes associated with rs12992882[chr2:223699865], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More