EnhancerDB
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  3. rs13027520[chr2:39755741]
Enhancers that have rs13027520[chr2:39755741]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39748525 39763075 enh18469
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs13027520[chr2:39755741]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39755732 39755747 HNF1A JASPAR yes 73212819
chr2 39755733 39755746 HNF1B JASPAR yes 73212820
chr2 39755735 39755745 PAX3 JASPAR yes 73212821
chr2 39755735 39755745 PAX7 JASPAR yes 73212822
chr2 39755737 39755747 BARHL2 JASPAR yes 73212823
chr2 39755739 39755743 YY1 TRANSFAC yes 73212824
Genes associated with rs13027520[chr2:39755741], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More