EnhancerDB
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  3. rs13193343[chr6:41676499]
Enhancers that have rs13193343[chr6:41676499]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs13193343[chr6:41676499]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41676489 41676507 E2F3 JASPAR yes 101667528
chr6 41676490 41676506 E2F2 JASPAR yes 101667529
chr6 41676492 41676507 NFYB JASPAR yes 101667530
chr6 41676494 41676510 NFYA JASPAR yes 101667531
chr6 41676495 41676500 SP1 TRANSFAC yes 101667532
chr6 41676497 41676508 CDX2 JASPAR yes 101667533
chr6 41676498 41676509 HOXA10 JASPAR yes 101667534
chr6 41676498 41676510 SRF JASPAR yes 101667535
chr6 41676499 41676503 H1TF2 TRANSFAC yes 101667536
chr6 41676499 41676503 NFE TRANSFAC yes 101667537
chr6 41676499 41676503 SRF TRANSFAC yes 101667538
chr6 41676499 41676508 CDX1 JASPAR yes 101667539
chr6 41676499 41676509 HOXA13 JASPAR yes 101667540
chr6 41676499 41676509 HOXB13 JASPAR yes 101667541
chr6 41676499 41676509 HOXD13 JASPAR yes 101667542
Genes associated with rs13193343[chr6:41676499], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More