EnhancerDB
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Enhancers that have rs1320841[chr2:26945566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26940914 26949809 enh18371
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Heart
chr2 26942649 26946100 vista816
VISTA
Transcript factors that have rs1320841[chr2:26945566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26945563 26945577 POU4F1 JASPAR yes 68244985
chr2 26945563 26945577 POU4F1 JASPAR yes 72549215
chr2 26945563 26945579 POU4F2 JASPAR yes 68244986
chr2 26945563 26945579 POU4F3 JASPAR yes 68244987
chr2 26945563 26945579 POU4F2 JASPAR yes 72549216
chr2 26945563 26945579 POU4F3 JASPAR yes 72549217
chr2 26945566 26945576 EMX1 JASPAR yes 68244988
chr2 26945566 26945576 EMX2 JASPAR yes 68244989
chr2 26945566 26945576 GSX1 JASPAR yes 68244990
chr2 26945566 26945576 LHX2 JASPAR yes 68244991
chr2 26945566 26945576 LHX6 JASPAR yes 68244992
chr2 26945566 26945576 MIXL1 JASPAR yes 68244993
chr2 26945566 26945576 MNX1 JASPAR yes 68244994
chr2 26945566 26945576 NOTO JASPAR yes 68244995
chr2 26945566 26945576 POU6F1 JASPAR yes 68244996
chr2 26945566 26945576 RAX JASPAR yes 68244997
chr2 26945566 26945576 EMX1 JASPAR yes 72549218
chr2 26945566 26945576 EMX2 JASPAR yes 72549219
chr2 26945566 26945576 GSX1 JASPAR yes 72549220
chr2 26945566 26945576 LHX2 JASPAR yes 72549221
chr2 26945566 26945576 LHX6 JASPAR yes 72549222
chr2 26945566 26945576 MIXL1 JASPAR yes 72549223
chr2 26945566 26945576 MNX1 JASPAR yes 72549224
chr2 26945566 26945576 NOTO JASPAR yes 72549225
chr2 26945566 26945576 POU6F1 JASPAR yes 72549226
chr2 26945566 26945576 RAX JASPAR yes 72549227
Genes associated with rs1320841[chr2:26945566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More