EnhancerDB
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  3. rs13214412[chr6:41674246]
Enhancers that have rs13214412[chr6:41674246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs13214412[chr6:41674246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41674227 41674247 RREB1 JASPAR yes 101667205
chr6 41674235 41674249 PLAG1 JASPAR yes 101667206
chr6 41674235 41674255 RREB1 JASPAR yes 101667207
chr6 41674237 41674258 ZNF263 JASPAR yes 101667208
chr6 41674242 41674252 SP1 JASPAR yes 101667209
chr6 41674242 41674252 ZNF740 JASPAR yes 101667210
chr6 41674242 41674262 RREB1 JASPAR yes 101667211
chr6 41674243 41674263 RREB1 JASPAR yes 101667212
chr6 41674244 41674254 SP1 JASPAR yes 101667213
chr6 41674244 41674254 ZNF740 JASPAR yes 101667214
chr6 41674245 41674255 ZNF740 JASPAR yes 101667215
Genes associated with rs13214412[chr6:41674246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More