EnhancerDB
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Enhancers that have rs13334583[chr16:29304432]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs13334583[chr16:29304432]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29304148 29304712 MYOD GTRD no Muscle (Myoblast) 108191441
chr16 29304292 29304631 ZNF143 GTRD no Epithelial (MCF-7) 21702222
chr16 29304292 29304631 ZNF143 GTRD no Epithelial (MCF-7) 108191442
chr16 29304297 29304727 ZNF274 GTRD no Bone Marrow (K562) 21702223
chr16 29304297 29304727 ZNF274 GTRD no Bone Marrow (K562) 108191443
chr16 29304299 29304523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702224
chr16 29304299 29304523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108191444
chr16 29304300 29304490 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21702225
chr16 29304300 29304490 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108191445
chr16 29304425 29304440 ZIC4 JASPAR yes 10258398
chr16 29304427 29304442 RUNX2 JASPAR yes 10258399
chr16 29304430 29304440 MAX JASPAR yes 10258400
Genes associated with rs13334583[chr16:29304432], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 30087299 30096698 + PPP4C ENSG00000149923.9 30087299 782867 Esophagus 1.68488e-05 14728
chr16 30087299 30096698 + PPP4C ENSG00000149923.9 30087299 782867 Breast 6.85224e-07 14728
chr16 30087299 30096698 + PPP4C ENSG00000149923.9 30087299 782867 Thyroid 0.000424784 14728