EnhancerDB
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  3. rs13335621[chr16:88365469]
Enhancers that have rs13335621[chr16:88365469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs13335621[chr16:88365469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88364943 88366268 ZBTB33 GTRD no Lung (A549) 108221964
chr16 88365153 88366045 ZNF143 GTRD no Epithelial (MCF-7) 21736028
chr16 88365153 88366045 ZNF143 GTRD no Epithelial (MCF-7) 108221965
chr16 88365176 88366045 ZNF143 GTRD no Epithelial (MCF-7) 21736029
chr16 88365176 88366045 ZNF143 GTRD no Epithelial (MCF-7) 108221966
chr16 88365202 88366045 ZNF143 GTRD no Epithelial (MCF-7) 21736030
chr16 88365202 88366045 ZNF143 GTRD no Epithelial (MCF-7) 108221967
chr16 88365207 88366027 TCF7L2 GTRD no Colon (HCT116) 21736031
chr16 88365207 88366027 TCF7L2 GTRD no Colon (HCT116) 108221968
chr16 88365239 88365745 ZBTB33 GTRD no Lung (A549) 108221969
chr16 88365244 88365692 ZNF274 GTRD no Liver (HepG2) 108221970
chr16 88365329 88365613 ZNF274 GTRD no Liver (HepG2) 108221971
chr16 88365340 88365598 ZNF274 GTRD no Liver (HepG2) 108221972
chr16 88365409 88365557 ZNF274 GTRD no Liver (HepG2) 108221973
chr16 88365446 88365778 ZNF274 GTRD no Bone Marrow (K562) 21736032
chr16 88365446 88365778 ZNF274 GTRD no Bone Marrow (K562) 108221974
chr16 88365464 88365480 SOX8 JASPAR yes 12279553
chr16 88365466 88365470 YY1 TRANSFAC yes 12279554
chr16 88365467 88365481 ONECUT3 JASPAR yes 12279555
chr16 88365468 88365479 BATF JASPAR yes 12279556
Genes associated with rs13335621[chr16:88365469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More