EnhancerDB
  1. Home
  2. SNP
  3. rs13383088[chr2:235747598]
Enhancers that have rs13383088[chr2:235747598]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235728845 235759495 enh19348
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Lung
Transcript factors that have rs13383088[chr2:235747598]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235747582 235747603 REST JASPAR yes 81911118
chr2 235747583 235747602 REST JASPAR yes 81911119
chr2 235747593 235747599 GATA3 JASPAR yes 81911120
chr2 235747598 235747602 LFA1 TRANSFAC yes 81911121
Genes associated with rs13383088[chr2:235747598], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More