EnhancerDB
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  3. rs13406242[chr2:69054564]
Enhancers that have rs13406242[chr2:69054564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69053005 69068635 enh5634
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13406242[chr2:69054564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69054549 69054564 FOXP1 JASPAR yes 74800806
chr2 69054549 69054564 HNF1A JASPAR yes 74800807
chr2 69054550 69054564 FOXF2 JASPAR yes 74800809
chr2 69054550 69054564 ONECUT3 JASPAR yes 74800810
chr2 69054552 69054567 MEF2A JASPAR yes 74800815
chr2 69054553 69054568 MEF2C JASPAR yes 74800816
chr2 69054554 69054566 FOXC2 JASPAR yes 74800817
chr2 69054554 69054566 MEF2A JASPAR yes 74800818
chr2 69054554 69054566 MEF2B JASPAR yes 74800819
chr2 69054554 69054566 MEF2D JASPAR yes 74800820
chr2 69054555 69054565 MEF2A JASPAR yes 74800821
chr2 69054555 69054566 FOXB1 JASPAR yes 74800822
chr2 69054555 69054566 FOXC1 JASPAR yes 74800823
chr2 69054558 69054574 POU4F3 JASPAR yes 74800825
chr2 69054560 69054564 TEAD2 TRANSFAC yes 74800826
chr2 69054560 69054565 TBP TRANSFAC yes 74800827
chr2 69054560 69054566 TMF TRANSFAC yes 74800828
chr2 69054560 69054574 POU4F1 JASPAR yes 74800829
chr2 69054561 69054575 POU4F1 JASPAR yes 74800830
chr2 69054561 69054577 POU4F3 JASPAR yes 74800831
Genes associated with rs13406242[chr2:69054564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More