EnhancerDB
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  3. rs1378972[chr14:50365269]
Enhancers that have rs1378972[chr14:50365269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50362765 50389315 enh3174
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs1378972[chr14:50365269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50364436 50367496 TCF7L2 GTRD no Colon (HCT116) 21615586
chr14 50365187 50367052 TCF7L2 GTRD no Colon (HCT116) 21615588
chr14 50365261 50365282 IRF1 JASPAR yes 115205409
chr14 50365267 50365282 FOXP1 JASPAR yes 115205410
chr14 50365267 50365288 IRF1 JASPAR yes 115205411
chr14 50365268 50365289 IRF1 JASPAR yes 115205412
Genes associated with rs1378972[chr14:50365269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More