EnhancerDB
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  3. rs138067346[chr17:70425252]
Enhancers that have rs138067346[chr17:70425252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs138067346[chr17:70425252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70424742 70425361 ZNF274 GTRD no Blood (GM12878) 21785146
chr17 70424762 70425479 ZNF274 GTRD no Blood (GM12878) 21785147
chr17 70424781 70425520 ZNF274 GTRD no Blood (GM12878) 21785148
chr17 70425231 70425521 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785149
chr17 70425236 70425257 IRF1 JASPAR yes 55787313
chr17 70425247 70425268 ZNF263 JASPAR yes 55787316
chr17 70425248 70425263 LEF1 JASPAR yes 55787317
chr17 70425248 70425269 ZNF263 JASPAR yes 55787318
chr17 70425249 70425270 IRF1 JASPAR yes 55787319
chr17 70425251 70425272 ZNF263 JASPAR yes 55787320
Genes associated with rs138067346[chr17:70425252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More