EnhancerDB
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  3. rs138111309[chr1:227952843]
Enhancers that have rs138111309[chr1:227952843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227936025 227954000 enh47302
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138111309[chr1:227952843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227952275 227954257 TCF7L2 GTRD no Colon (HCT116) 107876646
chr1 227952841 227952856 HNF4G JASPAR yes 35886633
chr1 227952842 227952856 RXRB JASPAR yes 35886634
chr1 227952842 227952856 RXRG JASPAR yes 35886635
chr1 227952842 227952857 HNF4A JASPAR yes 35886636
Genes associated with rs138111309[chr1:227952843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More