EnhancerDB
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  3. rs138250200[chr2:236427977]
Enhancers that have rs138250200[chr2:236427977]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138250200[chr2:236427977]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236427973 236427992 RFX2 JASPAR yes 81977388
chr2 236427975 236427990 RFX5 JASPAR yes 81977389
chr2 236427977 236427993 RFX4 JASPAR yes 81977390
Genes associated with rs138250200[chr2:236427977], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More