EnhancerDB
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  3. rs138299516[chr17:53519558]
Enhancers that have rs138299516[chr17:53519558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs138299516[chr17:53519558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53519539 53519560 IRF1 JASPAR yes 54851248
chr17 53519545 53519560 MEF2C JASPAR yes 54851249
chr17 53519545 53519566 IRF1 JASPAR yes 54851250
chr17 53519551 53519566 MEF2C JASPAR yes 54851251
chr17 53519551 53519572 IRF1 JASPAR yes 54851252
chr17 53519552 53519564 MEF2A JASPAR yes 54851253
chr17 53519553 53519566 POU3F3 JASPAR yes 54851254
Genes associated with rs138299516[chr17:53519558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More