EnhancerDB
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  3. rs138342854[chr1:203284513]
Enhancers that have rs138342854[chr1:203284513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138342854[chr1:203284513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203284089 203285445 ZNF143 GTRD no Epithelial (MCF-7) 21368261
chr1 203284100 203285469 ZNF143 GTRD no Epithelial (MCF-7) 21368262
chr1 203284165 203285124 ZNF143 GTRD no Epithelial (MCF-7) 21368263
chr1 203284188 203285388 ZNF274 GTRD no Bone Marrow (K562) 21368264
chr1 203284269 203285507 ZNF143 GTRD no Epithelial (MCF-7) 21368265
chr1 203284308 203285093 ZNF143 GTRD no Epithelial (MCF-7) 21368266
chr1 203284311 203285133 ZNF143 GTRD no Epithelial (MCF-7) 21368267
chr1 203284346 203285050 ZNF143 GTRD no Epithelial (MCF-7) 21368268
chr1 203284377 203284878 ZNF143 GTRD no Epithelial (MCF-7) 21368269
chr1 203284462 203285205 ZNF143 GTRD no Epithelial (MCF-7) 21368270
chr1 203284501 203284514 NR2F1 JASPAR yes 34616337
chr1 203284503 203284521 RARA JASPAR yes 34616339
Genes associated with rs138342854[chr1:203284513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More