EnhancerDB
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  3. rs138440724[chr1:202054209]
Enhancers that have rs138440724[chr1:202054209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 202054141 202054434 vista4595
VISTA
Transcript factors that have rs138440724[chr1:202054209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202053897 202054213 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366705
chr1 202053897 202054213 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857722
chr1 202053906 202054290 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21366706
chr1 202053906 202054290 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857723
chr1 202054012 202054468 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366707
chr1 202054012 202054468 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857724
chr1 202054018 202054308 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366708
chr1 202054018 202054308 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857725
chr1 202054039 202054503 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21366709
chr1 202054039 202054503 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107857726
chr1 202054049 202054329 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366710
chr1 202054049 202054329 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857727
chr1 202054103 202054719 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366711
chr1 202054103 202054719 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857728
chr1 202054161 202054437 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366712
chr1 202054161 202054437 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857729
chr1 202054174 202054704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366713
chr1 202054174 202054704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857730
chr1 202054201 202054214 NFKB1 JASPAR yes 34551504
chr1 202054201 202054214 NFKB2 JASPAR yes 34551505
chr1 202054201 202054214 NFKB1 JASPAR yes 118433879
chr1 202054201 202054214 NFKB2 JASPAR yes 118433880
chr1 202054209 202054773 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366714
chr1 202054209 202054773 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857731
Genes associated with rs138440724[chr1:202054209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More