EnhancerDB
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  3. rs138456290[chr12:46562169]
Enhancers that have rs138456290[chr12:46562169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs138456290[chr12:46562169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46561810 46563550 ZNF274 GTRD no Cervix (HeLa-S3) 21540896
chr12 46561850 46563426 ZBTB33 GTRD no Lung (A549) 21540897
chr12 46561856 46563440 ZBTB33 GTRD no Lung (A549) 21540898
chr12 46561860 46564028 ZNF274 GTRD no Cervix (HeLa-S3) 21540899
chr12 46561872 46562785 ZNF143 GTRD no Epithelial (MCF-7) 21540900
chr12 46561899 46563472 ZBTB33 GTRD no Lung (A549) 21540901
chr12 46561913 46562661 ZNF143 GTRD no Epithelial (MCF-7) 21540902
chr12 46561927 46563699 ZNF274 GTRD no Cervix (HeLa-S3) 21540903
chr12 46561943 46563519 ZNF274 GTRD no Cervix (HeLa-S3) 21540904
chr12 46561944 46563473 ZNF274 GTRD no Cervix (HeLa-S3) 21540905
chr12 46561967 46563539 ZNF274 GTRD no Cervix (HeLa-S3) 21540906
chr12 46562010 46563556 ZNF274 GTRD no Cervix (HeLa-S3) 21540907
chr12 46562060 46563346 ZBTB33 GTRD no Lung (A549) 21540908
chr12 46562096 46563348 ZBTB33 GTRD no Brain (SK-N-SH) 21540909
chr12 46562106 46563340 ZNF274 GTRD no Cervix (HeLa-S3) 21540910
chr12 46562108 46563317 ZBTB33 GTRD no Brain (SK-N-SH) 21540911
chr12 46562111 46562698 ZBTB33 GTRD no Lung (A549) 21540912
chr12 46562116 46563556 ZNF274 GTRD no Cervix (HeLa-S3) 21540913
chr12 46562129 46563537 ZBTB33 GTRD no Lung (A549) 21540914
chr12 46562158 46562174 ZNF143 JASPAR yes 120600947
chr12 46562162 46562173 FOS JASPAR yes 120600948
chr12 46562162 46562173 JUND JASPAR yes 120600949
chr12 46562163 46562174 JUNB JASPAR yes 120600950
chr12 46562164 46562170 JUN TRANSFAC yes 120600951
chr12 46562166 46563275 ZBTB33 GTRD no Lung (A549) 21540915
chr12 46562168 46563335 ZBTB33 GTRD no Brain (SK-N-SH) 21540916
Genes associated with rs138456290[chr12:46562169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More