EnhancerDB
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  3. rs138462576[chr17:76880823]
Enhancers that have rs138462576[chr17:76880823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76867725 76884335 enh17416
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138462576[chr17:76880823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76879843 76881202 TCF7L2 GTRD no Colon (HCT116) 21795329
chr17 76879843 76881202 TCF7L2 GTRD no Colon (HCT116) 108304296
chr17 76879978 76881170 TCF7L2 GTRD no Colon (HCT116) 21795336
chr17 76879978 76881170 TCF7L2 GTRD no Colon (HCT116) 108304315
chr17 76880017 76881020 TCF7L2 GTRD no Colon (HCT116) 21795337
chr17 76880017 76881020 TCF7L2 GTRD no Colon (HCT116) 108304316
chr17 76880039 76881107 TCF7L2 GTRD no Colon (HCT116) 21795339
chr17 76880039 76881107 TCF7L2 GTRD no Colon (HCT116) 108304318
chr17 76880810 76880825 NR2C2 JASPAR yes 56185872
Genes associated with rs138462576[chr17:76880823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More