EnhancerDB
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  3. rs138476299[chr1:9840676]
Enhancers that have rs138476299[chr1:9840676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs138476299[chr1:9840676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9839811 9840895 P63 GTRD no Skin (Keratinocyte) 21325228
chr1 9839811 9840895 P63 GTRD no Skin (Keratinocyte) 107802030
chr1 9840663 9840678 HNF1A JASPAR yes 26677239
chr1 9840664 9840677 HNF1B JASPAR yes 26677243
chr1 9840665 9840676 BATF JASPAR yes 26677247
chr1 9840665 9840677 HNF1B JASPAR yes 26677248
chr1 9840672 9840687 MEF2A JASPAR yes 26677249
chr1 9840673 9840688 MEF2C JASPAR yes 26677250
chr1 9840674 9840686 MEF2A JASPAR yes 26677251
chr1 9840675 9840685 MEF2A JASPAR yes 26677252
chr1 9840676 9840680 YY1 TRANSFAC yes 26677253
Genes associated with rs138476299[chr1:9840676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More