EnhancerDB
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  3. rs138556459[chr1:25023507]
Enhancers that have rs138556459[chr1:25023507]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs138556459[chr1:25023507]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25023502 25023514 FOXI1 JASPAR yes 27519579
chr1 25023502 25023522 RREB1 JASPAR yes 27519580
chr1 25023503 25023515 FOXC2 JASPAR yes 27519581
chr1 25023503 25023517 ONECUT3 JASPAR yes 27519582
chr1 25023505 25023509 YY1 TRANSFAC yes 27519583
chr1 25023506 25023521 FOXP1 JASPAR yes 27519584
chr1 25023507 25023518 FOXP2 JASPAR yes 27519585
chr1 25023507 25023527 RREB1 JASPAR yes 27519586
Genes associated with rs138556459[chr1:25023507], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More