EnhancerDB
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  3. rs138563832[chr17:54865848]
Enhancers that have rs138563832[chr17:54865848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs138563832[chr17:54865848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54863956 54866254 ZNF274 GTRD no Bone Marrow (K562) 21773121
chr17 54863956 54866254 ZNF274 GTRD no Bone Marrow (K562) 108273256
chr17 54864026 54865919 ZNF274 GTRD no Bone Marrow (K562) 21773122
chr17 54864026 54865919 ZNF274 GTRD no Bone Marrow (K562) 108273260
chr17 54865848 54865854 SOX10 JASPAR yes 54913328
Genes associated with rs138563832[chr17:54865848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More