EnhancerDB
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  3. rs138583243[chr17:53524331]
Enhancers that have rs138583243[chr17:53524331]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs138583243[chr17:53524331]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53524026 53524590 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772652
chr17 53524043 53524608 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772654
chr17 53524094 53524370 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772655
chr17 53524096 53524720 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772656
chr17 53524101 53524476 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772657
chr17 53524107 53524367 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772658
chr17 53524132 53524422 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772659
chr17 53524132 53524523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772660
chr17 53524140 53524535 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772661
chr17 53524143 53524474 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772662
chr17 53524146 53524526 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772663
chr17 53524175 53524365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772665
chr17 53524186 53524488 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772666
chr17 53524259 53524559 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772667
chr17 53524273 53524371 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772668
chr17 53524307 53524583 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772669
chr17 53524313 53524334 IRF1 JASPAR yes 54851990
chr17 53524316 53524540 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772670
chr17 53524325 53524341 POU4F2 JASPAR yes 54851991
chr17 53524325 53524341 POU4F3 JASPAR yes 54851992
chr17 53524327 53524341 POU4F1 JASPAR yes 54851993
chr17 53524328 53524338 GSX2 JASPAR yes 54851994
chr17 53524328 53524338 HOXB2 JASPAR yes 54851995
chr17 53524328 53524338 HOXB3 JASPAR yes 54851996
chr17 53524328 53524338 MNX1 JASPAR yes 54851997
chr17 53524328 53524338 POU6F1 JASPAR yes 54851998
chr17 53524329 53524337 LMX1A JASPAR yes 54851999
chr17 53524329 53524337 LMX1B JASPAR yes 54852000
chr17 53524329 53524337 NKX6-1 JASPAR yes 54852001
chr17 53524329 53524337 NKX6-2 JASPAR yes 54852002
chr17 53524329 53524337 VAX1 JASPAR yes 54852003
chr17 53524329 53524337 VAX2 JASPAR yes 54852004
chr17 53524329 53524337 VSX1 JASPAR yes 54852005
chr17 53524329 53524337 VSX2 JASPAR yes 54852006
Genes associated with rs138583243[chr17:53524331], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More