EnhancerDB
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  3. rs138707841[chr1:90125185]
Enhancers that have rs138707841[chr1:90125185]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90121516 90128575 enh86810
Stomach Uterus Blood (T-cell) Blood (GM12878)
Transcript factors that have rs138707841[chr1:90125185]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90125182 90125190 HOXA5 JASPAR yes 30611062
chr1 90125183 90125193 EMX1 JASPAR yes 30611063
chr1 90125183 90125193 EMX2 JASPAR yes 30611064
chr1 90125183 90125193 GBX2 JASPAR yes 30611065
chr1 90125183 90125193 GSX1 JASPAR yes 30611066
chr1 90125183 90125193 GSX2 JASPAR yes 30611067
chr1 90125183 90125193 HOXB2 JASPAR yes 30611068
chr1 90125183 90125193 HOXB3 JASPAR yes 30611069
chr1 90125183 90125193 LHX6 JASPAR yes 30611070
chr1 90125183 90125193 MEOX1 JASPAR yes 30611071
chr1 90125183 90125193 MEOX2 JASPAR yes 30611072
chr1 90125183 90125193 MNX1 JASPAR yes 30611073
chr1 90125183 90125193 POU6F1 JASPAR yes 30611074
chr1 90125183 90125193 RAX JASPAR yes 30611075
chr1 90125184 90125192 LMX1A JASPAR yes 30611076
chr1 90125184 90125192 LMX1B JASPAR yes 30611077
chr1 90125184 90125192 NKX6-1 JASPAR yes 30611078
chr1 90125184 90125192 NKX6-2 JASPAR yes 30611079
chr1 90125184 90125192 PDX1 JASPAR yes 30611080
chr1 90125184 90125192 VAX1 JASPAR yes 30611081
chr1 90125184 90125192 VAX2 JASPAR yes 30611082
chr1 90125184 90125192 VSX1 JASPAR yes 30611083
chr1 90125185 90125195 PAX3 JASPAR yes 30611084
chr1 90125185 90125195 PAX7 JASPAR yes 30611085
Genes associated with rs138707841[chr1:90125185], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More