EnhancerDB
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  3. rs138780835[chr12:122227458]
Enhancers that have rs138780835[chr12:122227458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs138780835[chr12:122227458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 21579357
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065474
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065475
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065476
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065477
chr12 122224938 122227531 ZNF274 GTRD no Blood (GM12878) 21579406
chr12 122224938 122227531 ZNF274 GTRD no Blood (GM12878) 108065545
chr12 122224938 122227531 ZNF274 GTRD no Blood (GM12878) 108065546
chr12 122224938 122227542 ZNF274 GTRD no Blood (GM12878) 21579407
chr12 122224938 122227542 ZNF274 GTRD no Blood (GM12878) 108065547
chr12 122224938 122227542 ZNF274 GTRD no Blood (GM12878) 108065548
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 21579424
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065568
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065569
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065570
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065571
chr12 122225195 122227468 ZNF274 GTRD no Blood (GM12878) 21579431
chr12 122225195 122227468 ZNF274 GTRD no Blood (GM12878) 108065580
chr12 122225212 122227542 ZBTB33 GTRD no Lung (A549) 108065585
chr12 122225212 122227542 ZBTB33 GTRD no Lung (A549) 108065586
chr12 122225416 122227823 ZNF143 GTRD no Epithelial (MCF-7) 21579454
chr12 122225416 122227823 ZNF143 GTRD no Epithelial (MCF-7) 108065606
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 21579455
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 108065607
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 108065608
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 108065609
chr12 122225509 122227536 ZNF143 GTRD no Epithelial (MCF-7) 21579456
chr12 122225509 122227536 ZNF143 GTRD no Epithelial (MCF-7) 108065610
chr12 122225717 122227581 ZNF274 GTRD no Bone Marrow (K562) 21579457
chr12 122225717 122227581 ZNF274 GTRD no Bone Marrow (K562) 108065611
chr12 122225722 122227942 ZNF274 GTRD no Bone Marrow (K562) 21579458
chr12 122225722 122227942 ZNF274 GTRD no Bone Marrow (K562) 108065612
chr12 122225722 122227942 ZNF274 GTRD no Bone Marrow (K562) 108065613
chr12 122226912 122227512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579459
chr12 122226912 122227512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065614
chr12 122227036 122228767 POLR2A UCSC Txn Factor no Conserved 108065615
chr12 122227036 122228767 POLR2A UCSC Txn Factor no Conserved 108065616
chr12 122227036 122228767 POLR2A UCSC Txn Factor no Conserved 108065617
chr12 122227280 122227656 TCF7L2 GTRD no Colon (HCT116) 21579460
chr12 122227280 122227656 TCF7L2 GTRD no Colon (HCT116) 108065618
chr12 122227313 122227577 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579461
chr12 122227313 122227577 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065619
chr12 122227441 122227957 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579462
chr12 122227441 122227957 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065620
chr12 122227441 122227957 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065621
chr12 122227457 122227461 ESR1 TRANSFAC yes 124246844
Genes associated with rs138780835[chr12:122227458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More