EnhancerDB
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  3. rs138852725[chr2:26947541]
Enhancers that have rs138852725[chr2:26947541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26940914 26949809 enh18371
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Heart
Transcript factors that have rs138852725[chr2:26947541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26946644 26947817 POLR2A UCSC Txn Factor no Conserved 108431463
chr2 26946970 26947586 TFAP2C UCSC Txn Factor no Conserved 108431466
chr2 26946973 26947710 TCF7L2 UCSC Txn Factor no Conserved 108431467
chr2 26947010 26947674 TFAP2A UCSC Txn Factor no Conserved 108431468
chr2 26947522 26947541 REST JASPAR yes 72549484
chr2 26947537 26947541 LFA1 TRANSFAC yes 72549485
chr2 26947537 26947557 RREB1 JASPAR yes 72549486
chr2 26947539 26947554 RFX5 JASPAR yes 72549487
Genes associated with rs138852725[chr2:26947541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More