EnhancerDB
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  3. rs138909462[chr2:28582389]
Enhancers that have rs138909462[chr2:28582389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr2 28582195 28582710 vista30824
VISTA
Transcript factors that have rs138909462[chr2:28582389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28582091 28582429 JUND UCSC Txn Factor no Conserved 108431599
chr2 28582129 28582515 RUNX3 UCSC Txn Factor no Conserved 108431600
chr2 28582132 28582743 MAX UCSC Txn Factor no Conserved 108431601
chr2 28582147 28582403 ATF1 UCSC Txn Factor no Conserved 108431602
chr2 28582340 28582480 NR2F2 UCSC Txn Factor no Conserved 108431603
chr2 28582363 28582712 BHLHE40 UCSC Txn Factor no Conserved 108431604
chr2 28582374 28582392 RARA JASPAR yes 22024498
chr2 28582374 28582392 RARA JASPAR yes 72641648
chr2 28582380 28582393 NR2F1 JASPAR yes 22024500
chr2 28582380 28582393 NR2F1 JASPAR yes 72641650
chr2 28582381 28582395 PLAG1 JASPAR yes 22024501
chr2 28582381 28582395 PLAG1 JASPAR yes 72641651
chr2 28582381 28582396 NR2C2 JASPAR yes 22024502
chr2 28582381 28582396 NR2C2 JASPAR yes 72641652
chr2 28582383 28582400 RXRA JASPAR yes 22024503
chr2 28582383 28582400 RXRA JASPAR yes 72641653
chr2 28582384 28582396 INSM1 JASPAR yes 22024505
chr2 28582384 28582396 INSM1 JASPAR yes 72641655
Genes associated with rs138909462[chr2:28582389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 28112808 28561768 + BRE ENSG00000158019.16 28112808 20621 Heart 0.23116 2239