EnhancerDB
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  3. rs138959202[chr6:110845579]
Enhancers that have rs138959202[chr6:110845579]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138959202[chr6:110845579]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110845571 110845582 STAT1 JASPAR yes 104293670
chr6 110845574 110845595 IRF1 JASPAR yes 104293672
chr6 110845578 110845584 TBP TRANSFAC yes 104293673
chr6 110845578 110845593 PRDM1 JASPAR yes 104293674
chr6 110845578 110845593 STAT2 JASPAR yes 104293675
Genes associated with rs138959202[chr6:110845579], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More