EnhancerDB
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  3. rs139012041[chr17:45352681]
Enhancers that have rs139012041[chr17:45352681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 45349694 45360075 enh4445
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs139012041[chr17:45352681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 45352491 45353747 ZNF274 GTRD no Blood (GM12878) 21766644
chr17 45352491 45353747 ZNF274 GTRD no Blood (GM12878) 108267171
chr17 45352570 45353086 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21766645
chr17 45352570 45353086 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108267172
chr17 45352598 45353054 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21766646
chr17 45352598 45353054 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108267173
chr17 45352617 45353705 ZNF274 GTRD no Blood (GM12878) 21766647
chr17 45352617 45353705 ZNF274 GTRD no Blood (GM12878) 108267174
chr17 45352679 45352684 SP1 TRANSFAC yes 54523335
chr17 45352679 45352693 PLAG1 JASPAR yes 54523336
chr17 45352680 45352694 EBF1 JASPAR yes 54523337
chr17 45352680 45353064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21766648
chr17 45352680 45353064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108267175
chr17 45352681 45352692 EBF1 JASPAR yes 54523338
Genes associated with rs139012041[chr17:45352681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More