EnhancerDB
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  3. rs139015206[chr17:80459406]
Enhancers that have rs139015206[chr17:80459406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs139015206[chr17:80459406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80458720 80459409 TCF7L2 GTRD no Colon (HCT116) 21800677
chr17 80459087 80459647 ZNF274 GTRD no Bone Marrow (K562) 21800678
chr17 80459089 80459763 ZNF274 GTRD no Bone Marrow (K562) 21800679
chr17 80459102 80459702 ZNF274 GTRD no Bone Marrow (K562) 21800680
chr17 80459103 80459746 ZNF274 GTRD no Bone Marrow (K562) 21800681
chr17 80459156 80459528 ZNF274 GTRD no Bone Marrow (K562) 21800682
chr17 80459302 80459480 ZNF274 GTRD no Bone Marrow (K562) 21800683
chr17 80459406 80459410 LFA1 TRANSFAC yes 56368347
Genes associated with rs139015206[chr17:80459406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More