EnhancerDB
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  3. rs139019826[chr15:99992844]
Enhancers that have rs139019826[chr15:99992844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139019826[chr15:99992844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99992393 99992978 TCF7L2 GTRD no Colon (HCT116) 21682124
chr15 99992486 99992879 TCF7L2 GTRD no Colon (HCT116) 21682125
chr15 99992513 99993376 ZNF143 GTRD no Epithelial (MCF-7) 21682126
chr15 99992513 99993376 ZNF143 GTRD no Epithelial (MCF-7) 108168409
chr15 99992538 99993300 TCF7L2 GTRD no Colon (HCT116) 21682127
chr15 99992538 99993300 TCF7L2 GTRD no Colon (HCT116) 108168410
chr15 99992835 99992849 PLAG1 JASPAR yes 25875558
chr15 99992835 99993271 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168411
chr15 99992838 99992844 YY1 JASPAR yes 25875559
Genes associated with rs139019826[chr15:99992844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More