EnhancerDB
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  3. rs139099752[chr6:18343928]
Enhancers that have rs139099752[chr6:18343928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 18333303 18355574 enh8984
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 18343795 18344357 vista51216
VISTA
Transcript factors that have rs139099752[chr6:18343928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 18343920 18343938 NFYA JASPAR yes 70329250
chr6 18343920 18343938 NFYA JASPAR yes 100433858
chr6 18343924 18343928 H1TF2 TRANSFAC yes 70329251
chr6 18343924 18343928 NFE TRANSFAC yes 70329252
chr6 18343924 18343928 SRF TRANSFAC yes 70329253
chr6 18343924 18343928 H1TF2 TRANSFAC yes 100433859
chr6 18343924 18343928 NFE TRANSFAC yes 100433860
chr6 18343924 18343928 SRF TRANSFAC yes 100433861
chr6 18343924 18343934 HOXA13 JASPAR yes 70329254
chr6 18343924 18343934 HOXB13 JASPAR yes 70329255
chr6 18343924 18343934 HOXD13 JASPAR yes 70329256
chr6 18343924 18343934 HOXA13 JASPAR yes 100433862
chr6 18343924 18343934 HOXB13 JASPAR yes 100433863
chr6 18343924 18343934 HOXD13 JASPAR yes 100433864
chr6 18343928 18343942 NR2F1 JASPAR yes 70329257
chr6 18343928 18343942 NR2F1 JASPAR yes 100433865
Genes associated with rs139099752[chr6:18343928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More