EnhancerDB
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  3. rs139171228[chr4:4483196]
Enhancers that have rs139171228[chr4:4483196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 4472125 4496609 enh7856
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs139171228[chr4:4483196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 4483184 4483198 ONECUT1 JASPAR yes 87947360
chr4 4483184 4483198 ONECUT2 JASPAR yes 87947361
chr4 4483184 4483198 ONECUT3 JASPAR yes 87947362
chr4 4483192 4483204 FOXC2 JASPAR yes 87947364
chr4 4483194 4483198 YY1 TRANSFAC yes 87947365
chr4 4483196 4483211 FOXP1 JASPAR yes 87947366
Genes associated with rs139171228[chr4:4483196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More