EnhancerDB
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  3. rs139259109[chr16:85193987]
Enhancers that have rs139259109[chr16:85193987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139259109[chr16:85193987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85193810 85194349 ZNF143 GTRD no Epithelial (MCF-7) 21720496
chr16 85193856 85194279 ZNF143 GTRD no Epithelial (MCF-7) 21720497
chr16 85193874 85194210 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720498
chr16 85193957 85194397 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720499
chr16 85193967 85194076 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720500
chr16 85193973 85194047 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720501
chr16 85193987 85194000 ELF3 JASPAR yes 12027275
Genes associated with rs139259109[chr16:85193987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More