EnhancerDB
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  3. rs139298367[chr12:125114815]
Enhancers that have rs139298367[chr12:125114815]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139298367[chr12:125114815]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125114613 125115196 TCF7L2 GTRD no Colon (HCT116) 21581370
chr12 125114707 125115203 TCF7L2 GTRD no Colon (HCT116) 21581371
chr12 125114760 125115107 TCF7L2 GTRD no Colon (HCT116) 21581372
chr12 125114800 125114815 STAT2 JASPAR yes 124401376
chr12 125114802 125114816 IRF8 JASPAR yes 124401377
chr12 125114802 125114817 IRF9 JASPAR yes 124401378
chr12 125114810 125114821 STAT1 JASPAR yes 124401379
chr12 125114810 125114821 STAT3 JASPAR yes 124401380
Genes associated with rs139298367[chr12:125114815], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More