EnhancerDB
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  3. rs139343646[chr3:55605886]
Enhancers that have rs139343646[chr3:55605886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 55596805 55635295 enh7228
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139343646[chr3:55605886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 55605875 55605894 CTCF JASPAR yes 2526879
chr3 55605876 55605891 ZIC3 JASPAR yes 2526880
chr3 55605876 55605891 ZIC4 JASPAR yes 2526881
chr3 55605877 55605891 GLIS2 JASPAR yes 2526882
chr3 55605877 55605891 ZIC1 JASPAR yes 2526883
Genes associated with rs139343646[chr3:55605886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More