EnhancerDB
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  3. rs139362262[chr1:40289335]
Enhancers that have rs139362262[chr1:40289335]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139362262[chr1:40289335]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40289314 40289335 IRF1 JASPAR yes 28293696
chr1 40289316 40289337 IRF1 JASPAR yes 28293697
chr1 40289318 40289339 ZNF263 JASPAR yes 28293698
chr1 40289320 40289335 PRDM1 JASPAR yes 28293699
chr1 40289320 40289335 STAT2 JASPAR yes 28293700
chr1 40289320 40289341 IRF1 JASPAR yes 28293701
chr1 40289321 40289336 FOXP1 JASPAR yes 28293702
chr1 40289321 40289342 IRF1 JASPAR yes 28293703
chr1 40289321 40289342 ZNF263 JASPAR yes 28293704
chr1 40289325 40289340 STAT2 JASPAR yes 28293705
chr1 40289325 40289346 IRF1 JASPAR yes 28293706
chr1 40289326 40289341 FOXP1 JASPAR yes 28293707
chr1 40289329 40289343 STAT1 JASPAR yes 28293708
chr1 40289329 40289344 STAT2 JASPAR yes 28293709
chr1 40289329 40289350 IRF1 JASPAR yes 28293710
chr1 40289333 40289354 IRF1 JASPAR yes 28293711
Genes associated with rs139362262[chr1:40289335], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More