EnhancerDB
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  3. rs139370940[chr12:96593227]
Enhancers that have rs139370940[chr12:96593227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139370940[chr12:96593227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96592772 96593368 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053150
chr12 96592865 96593249 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053153
chr12 96593222 96593231 NKX3-2 JASPAR yes 123046171
chr12 96593222 96593232 NKX2-3 JASPAR yes 123046172
Genes associated with rs139370940[chr12:96593227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More