EnhancerDB
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  3. rs139394878[chr17:33411679]
Enhancers that have rs139394878[chr17:33411679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 33404685 33414376 enh4367
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Brain (SK-N-SH) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs139394878[chr17:33411679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 33411675 33411680 SP1 TRANSFAC yes 53995172
chr17 33411676 33411681 SP1 TRANSFAC yes 53995173
chr17 33411676 33411685 THAP1 JASPAR yes 53995174
chr17 33411679 33411683 LFA1 TRANSFAC yes 53995175
Genes associated with rs139394878[chr17:33411679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More