EnhancerDB
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  3. rs139405469[chr12:48218668]
Enhancers that have rs139405469[chr12:48218668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48214553 48225280 enh14688
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs139405469[chr12:48218668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48218656 48218670 GATA2 JASPAR yes 120719918
chr12 48218666 48218676 HOXA13 JASPAR yes 120719921
chr12 48218666 48218681 FOXP1 JASPAR yes 120719922
chr12 48218666 48218687 IRF1 JASPAR yes 120719923
chr12 48218667 48218671 YY1 TRANSFAC yes 120719924
chr12 48218667 48218688 IRF1 JASPAR yes 120719925
Genes associated with rs139405469[chr12:48218668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More