EnhancerDB
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  3. rs139405930[chr5:149518477]
Enhancers that have rs139405930[chr5:149518477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149515023 149530526 enh22711
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Lung (A549) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr5 149518246 149518623 vista49638
VISTA
Transcript factors that have rs139405930[chr5:149518477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149518470 149518486 SOX8 JASPAR yes 66862491
chr5 149518470 149518486 SOX8 JASPAR yes 70737867
chr5 149518472 149518487 FOXP1 JASPAR yes 66862492
chr5 149518472 149518487 FOXP1 JASPAR yes 70737868
chr5 149518473 149518484 FOXP2 JASPAR yes 66862493
chr5 149518473 149518484 FOXP2 JASPAR yes 70737869
chr5 149518473 149518487 FOXF2 JASPAR yes 66862494
chr5 149518473 149518487 FOXF2 JASPAR yes 70737870
chr5 149518476 149518487 CDX2 JASPAR yes 66862495
chr5 149518476 149518487 CDX2 JASPAR yes 70737871
Genes associated with rs139405930[chr5:149518477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More