EnhancerDB
  1. Home
  2. SNP
  3. rs139416272[chr9:116346231]
Enhancers that have rs139416272[chr9:116346231]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116325685 116352877 enh25925
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs139416272[chr9:116346231]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116346220 116346233 NFKB1 JASPAR yes 86427163
chr9 116346225 116346234 ZEB1 JASPAR yes 86427164
chr9 116346225 116346237 NHLH1 JASPAR yes 86427165
chr9 116346226 116346236 NHLH1 JASPAR yes 86427166
chr9 116346226 116346236 TCF3 JASPAR yes 86427167
chr9 116346226 116346236 TCF4 JASPAR yes 86427168
chr9 116346228 116346233 USF2 TRANSFAC yes 86427169
chr9 116346228 116346242 PLAG1 JASPAR yes 86427170
Genes associated with rs139416272[chr9:116346231], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More