EnhancerDB
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  3. rs139424331[chr16:88279017]
Enhancers that have rs139424331[chr16:88279017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs139424331[chr16:88279017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88278561 88281077 ZNF143 GTRD no Epithelial (MCF-7) 21735621
chr16 88278771 88279321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735622
chr16 88278849 88279379 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735623
chr16 88278977 88279493 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735625
chr16 88279010 88279017 E2F1 TRANSFAC yes 12270519
chr16 88279016 88279027 E2F6 JASPAR yes 12270520
Genes associated with rs139424331[chr16:88279017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More