EnhancerDB
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  3. rs139425598[chr1:114620235]
Enhancers that have rs139425598[chr1:114620235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 114615805 114628583 enh43027
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Esophagus Muscle (A673) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139425598[chr1:114620235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 114619224 114621414 ZNF143 GTRD no Epithelial (MCF-7) 21330381
chr1 114619735 114620963 ZNF143 GTRD no Epithelial (MCF-7) 21330382
chr1 114619775 114620903 ZNF143 GTRD no Epithelial (MCF-7) 21330383
chr1 114619792 114620988 ZNF143 GTRD no Epithelial (MCF-7) 21330384
chr1 114619875 114620928 ZNF143 GTRD no Epithelial (MCF-7) 21330385
chr1 114620188 114621078 ZNF143 GTRD no Epithelial (MCF-7) 21330386
chr1 114620227 114620242 PRDM1 JASPAR yes 31665713
chr1 114620234 114620238 YY1 TRANSFAC yes 31665714
Genes associated with rs139425598[chr1:114620235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More