EnhancerDB
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  3. rs139440797[chr17:42898145]
Enhancers that have rs139440797[chr17:42898145]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42894605 42906230 enh32204
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus
Transcript factors that have rs139440797[chr17:42898145]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42898136 42898146 PAX3 JASPAR yes 54416095
chr17 42898136 42898146 PAX7 JASPAR yes 54416096
chr17 42898137 42898153 SOX4 JASPAR yes 54416097
chr17 42898138 42898148 GSX2 JASPAR yes 54416098
chr17 42898138 42898148 LBX2 JASPAR yes 54416099
chr17 42898138 42898148 MIXL1 JASPAR yes 54416100
chr17 42898138 42898148 MNX1 JASPAR yes 54416101
chr17 42898138 42898148 RAX JASPAR yes 54416102
chr17 42898138 42898153 SOX21 JASPAR yes 54416103
chr17 42898139 42898147 ISX JASPAR yes 54416104
chr17 42898139 42898147 LHX9 JASPAR yes 54416105
chr17 42898139 42898147 LMX1B JASPAR yes 54416106
chr17 42898139 42898147 PRRX1 JASPAR yes 54416107
chr17 42898139 42898147 RAX2 JASPAR yes 54416108
chr17 42898139 42898147 SHOX JASPAR yes 54416109
chr17 42898139 42898147 UNCX JASPAR yes 54416110
Genes associated with rs139440797[chr17:42898145], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More