EnhancerDB
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  3. rs139453099[chr16:88372574]
Enhancers that have rs139453099[chr16:88372574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs139453099[chr16:88372574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88369785 88373141 ZNF143 GTRD no Epithelial (MCF-7) 21736132
chr16 88370856 88373232 ZNF274 GTRD no Bone Marrow (K562) 21736142
chr16 88372145 88372837 ZNF274 GTRD no Bone Marrow (K562) 21736149
chr16 88372222 88372818 ZNF274 GTRD no Bone Marrow (K562) 21736151
chr16 88372222 88372960 ZNF274 GTRD no Bone Marrow (K562) 21736152
chr16 88372442 88372880 ZNF274 GTRD no Bone Marrow (K562) 21736153
chr16 88372552 88372742 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21736154
chr16 88372558 88372576 ESR2 JASPAR yes 12280593
chr16 88372561 88372576 HNF4A JASPAR yes 12280594
chr16 88372562 88372577 HNF4G JASPAR yes 12280595
Genes associated with rs139453099[chr16:88372574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More