EnhancerDB
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  3. rs139476288[chr17:5739954]
Enhancers that have rs139476288[chr17:5739954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 5722485 5740477 enh32064
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9)
Transcript factors that have rs139476288[chr17:5739954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 5739946 5739956 MAX JASPAR yes 52887335
chr17 5739948 5739959 FOXA1 JASPAR yes 52887336
chr17 5739949 5739958 NFIX JASPAR yes 52887337
chr17 5739949 5739959 NFIA JASPAR yes 52887338
chr17 5739951 5739957 NFIC JASPAR yes 52887339
Genes associated with rs139476288[chr17:5739954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More